Literature | Infinity Bio Inc

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Literature

Publications from H. Benjamin Larman, PhD and Infinity Bio team

2023 (4)

Coexisting autoantibodies against transcription factor Sp4 are associated with decreased cancer risk in patients with dermatomyositis with anti-TIF1γ autoantibodies

Comprehensive profiling of pre-infection antibodies identifies HIV targets associated with viremic control and viral load

Efficient encoding of large antigenic spaces by epitope prioritization with Dolphyn

Applications of VirScan to broad serological profiling of bat reservoirs for emerging zoonoses

2022 (8)

Analysis of antibody binding specificities in twin and SNP-genotyped cohorts reveals that antiviral antibody epitope selection is a heritable trait

Detecting and quantifying antibody reactivity in PhIP-Seq data with BEER

Evaluation of multi-assay algorithms for cross-sectional HIV incidence estimation in settings with universal antiretroviral treatment

Phage display of environmental protein toxins and virulence factors reveals the prevalence, persistence, and genetics of antibody responses

PhIP-Seq Reveals Autoantibodies for Ubiquitously Expressed Antigens in Viral Myocarditis

Comprehensive profiling of antibody responses to the human anellome using programmable phage display

Greater Breadth of Vaccine-Induced Immunity in Females than Males Is Mediated by Increased Antibody Diversity in Germinal Center B Cells

Detecting antibody reactivities in Phage ImmunoPrecipitation Sequencing data

2021 (9)

Profiling serum antibodies with a pan allergen phage library identifies key wheat allergy epitopes.

Neutralizing IFNL3 Autoantibodies in Severe COVID-19 Identified Using Molecular Indexing of Proteins by Self-Assembly

Citrullination of a phage-displayed human peptidome library reveals the fine specificities of rheumatoid arthritis-associated autoantibodies

Antibody responses to endemic coronaviruses modulate COVID-19 convalescent plasma functionality

Markers of Polyfunctional SARS-CoV-2 Antibodies in Convalescent Plasma

HIV Antibody Profiles in HIV Controllers and Persons With Treatment-Induced Viral Suppression

A top scoring pairs classifier for recent HIV infections

TGM4: an immunogenic prostate-restricted antigen

Deconvoluting virome-wide antibody epitope reactivity profiles

2020 (4)

COVID-19 serology at population scale: SARS-CoV-2-specific antibody responses in saliva

Protease Activity Profiling via Programmable Phage Display of Comprehensive Proteome-Scale Peptide Libraries

Viral epitope profiling of COVID-19 patients reveals cross-reactivity and correlates of severity

SARS-CoV-2 antibody signatures robustly predict diverse antiviral functions relevant for convalescent plasma therapy

2019 (5)

Comprehensive Profiling of HIV Antibody Evolution

Measles virus infection diminishes preexisting antibodies that offer protection from other pathogens

Robust dengue virus infection in bat cells and limited innate immune responses coupled with positive serology from bats in IndoMalaya and Australasia.

LINE-1 ORF2p expression is nearly imperceptible in human cancers

Chronic Dengue Virus Panencephalitis in a Patient with Progressive Dementia with Extrapyramidal Features

2005-2018 (12)

Autoantigen discovery with a synthetic human peptidome (2011)

Protein interaction discovery using parallel analysis of translated ORFs (PLATO) (2013)

Discovery of protein interactions using parallel analysis of translated ORFs (PLATO) (2014)

Construction and Screening of a Lentiviral Secretome Library (2017)

Construction of a rationally designed antibody platform for sequencing-assisted selection (2012)

Cytosolic 5'-nucleotidase 1A autoimmunity in sporadic inclusion body myositis (2013)

Ontogeny of recognition specificity and functionality for the broadly neutralizing anti-HIV antibody 4E10 (2014)

Long-adapter single-strand oligonucleotide probes for the massively multiplexed cloning of kilobase genome regions (2017)

PhIP-Seq characterization of autoantibodies from patients with multiple sclerosis, type 1 diabetes and rheumatoid arthritis. (2013)

Autoreactivity and exceptional CDR plasticity (but not unusual polyspecificity) hinder elicitation of the anti-HIV antibody 4E10 (2013)

Viral immunology. Comprehensive serological profiling of human populations using a synthetic human virome (2015)

PhIP-Seq characterization of serum antibodies using oligonucleotide-encoded peptidomes (2018)

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